--- title: "PharMolix - Air Market" description: "PharMolix publishes 30 listings on Air Market." canonical: "https://airmarket.ai/@pharmolix" --- [Air Market](/) / [Creators](/creators) / PharMolix Creator # PharMolix **PharMolix on Air Market** | | | | --- | --- | | Listings | 30 | | GitHub | [PharMolix](https://github.com/PharMolix) | **Published listings, with what each one does** | Listing | Kind | What it does | | --- | --- | --- | | [Prodigy Binding Affinity Prediction for Protein Complex](/app/binding-affinity-prediction-prodigy) | Skill | You have the structure of a protein complex and want to know how strongly the parts bind. This predicts a binding affinity score from that… | | [Protein Subcellular Localization Prediction](/app/protein-subcellular-localization-prediction-biot5) | Skill | You have an amino acid sequence and want to know where in the cell that protein goes. This predicts the compartment, such as nucleus, cytop… | | [High-fitness AAV Mutant Proposal](/app/mutation-design-aav) | Skill | You are engineering the AAV capsid and need candidate mutants to try. This proposes variants of the VP1 capsid protein, refining them over… | | [IUPAC Name Identification (BioT5)](/app/iupac-name-identification-biot5) | Skill | You have a molecule written as a structure string and need its formal chemical name. This works out the IUPAC nomenclature for it. Reach fo… | | [UniProt Query](/app/uniprot-query) | Skill | You know a protein's ID, or just a gene name or the disease it relates to, and you need the record. This queries UniProt for sequences, met… | | [Text-Based Molecule Editing](/app/text-based-molecule-editing) | Skill | You have a molecule and a plain sentence about what should be better about it. This edits the molecule from that description and gives you… | | [Retrosynthetic Planning Expert](/app/retrosynthesis-planning) | Skill | You have a molecule you want to make and no clear path to it. This works the target backwards toward starting materials you can actually ge… | | [Protein Function Prediction](/app/protein-function-prediction) | Skill | You have an amino acid sequence and nothing else, and you want to know what the protein does. This predicts its function and properties fro… | | [STRING Protein-Protein Interaction Query](/app/ppi-string-query) | Skill | You have a protein and want to know what it interacts with, and how sure anyone is about it. This pulls those interaction partners and thei… | | [High-Fluorescence GFP Mutant Proposal](/app/mutation-design-gfp) | Skill | You are trying to improve Green Fluorescent Protein and need variants worth testing. This proposes mutants aimed at high fluorescence while… | | [Molecule Biochemical Significance Query](/app/molecule-biochemical-significance-query-biot5) | Skill | You have come across a molecule and want to know what it does in biology and chemistry, in sentences rather than tables. This explains its… | | [Functional Protein Design](/app/functional-protein-design) | Skill | You want a protein that does a particular job, and no existing sequence fits. This generates new protein sequences, and you can point the g… | | [ChEMBL Query](/app/chembl-query) | Skill | You have a target, a molecule, or a disease, and need the bioactivity data that connects them. This queries the ChEMBL database three ways:… | | [tFold Antibody-related Structure Prediction](/app/antibody-structure-prediction-tfold) | Skill | You have antibody sequences and want to know what shape they take. This predicts antibody and nanobody structures from sequence, and antige… | | [Boltz-2 Structure Prediction](/app/structure-prediction-boltz-2) | Skill | You have a complex, or a binder you designed, and you need a structure before committing to it. This predicts biomolecular structures using… | | [Spatial Transcriptomics Data I/O](/app/spatial-transcriptomics-spatial-data-io) | Skill | Your spatial transcriptomics data came off one platform and your analysis expects another shape. This loads runs from Visium, Xenium, MERFI… | | [scvi-tools Single-Cell Multi-Omics Analysis](/app/single-cell-multi-omics-analysis-scvi) | Skill | Your single-cell data came from several runs or several kinds of measurement, and it does not line up. This is a probabilistic deep learnin… | | [LangCell](/app/single-cell-foundation-model-langcell) | Skill | You have single-cell data and need to say what each cell is, but labelled examples are scarce or missing. This works with LangCell, which p… | | [Geneformer](/app/single-cell-foundation-model-geneformer) | Skill | You are working with Geneformer and the steps around it have their own names and order. This covers those steps: getting input ready, produ… | | [Similar Protein Retrieval](/app/similar-protein-retrieval) | Skill | You have one protein and want to know what else resembles it. This retrieves proteins with similar structures or sequences, or from the sam… | | [PubChem Query](/app/pubchem-query) | Skill | You have a drug name, or one compound you like, and you need the actual chemistry behind it. This looks the compound up in PubChem and hand… | | [Protein Mutation Analysis](/app/protein-mutation-analysis) | Skill | Someone hands you a genetic variant and asks what it means for the protein. This gathers the protein data, explains the effect of the mutat… | | [Protein-Ligand Binding Analysis with PLIP](/app/protein-ligand-binding-analysis-plip) | Skill | You have a structure file of a protein with something bound to it, and you want to know what is actually holding them together. This profil… | | [KEGG Query](/app/kegg-query) | Skill | You need reference facts about a drug, a pathway, or a disease and do not want to go browsing a database by hand. This queries KEGG and bri… | | [Drug Lead Analysis](/app/drug-lead-analysis) | Skill | You have one or more candidate molecules and need to know which are worth pursuing. This scores them for drug-likeness, predicts how the bo… | | [Drug-Drug Interaction Analysis](/app/drug-drug-interaction-analysis) | Skill | Someone is on several drugs at once and you need to know whether they clash. This checks a small set of medications against a known interac… | | [BioMed Skill Creator](/app/biomed-skill-creator) | Skill | You have a biomedical task you keep doing by hand and want it packaged so it runs the same way each time. This walks you through building i… | | [BoltzGen All-Atom Design](/app/protein-structure-design-boltzgen) | Skill | You are designing a protein where the details of the fit matter, not just the overall fold. This does all-atom design, so side chains are a… | | [Drug Candidate Discovery](/app/drug-candidate-discovery) | Skill | You know the disease or the protein you want to hit, but not what molecule to try. This generates candidate compounds for that target and t… | | [Biomedical Literature Search](/app/biomedical-literature-search) | Skill | You need to know what has been published on a topic and where. This searches PubMed and bioRxiv for research papers, returning titles, abst… | ## Links - [GitHub](https://github.com/PharMolix) --- Canonical URL: